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Anime & Manga
- Cerebus the Aardvark has en encounter with the "Three Wise Fellows" — three fools who engage in hijinks such as clamping pliers on one another's noses while kidnapping him when he is mistaken for the Messiah.
- The Flash has battled a trio of Stooge-like villains known as Winky, Blinky, and Noddy.
- One of Garfield's previous lives in Garfield: His 9 Lives was a Moe-like cat leading two mouse exterminators (his dimiwtted owners) resembling Larry and Curly.
- The Wrong Reflection: Eleya comes aboard a mirror universe Cardassian ship and tells the gul in command to "have Larry, Curly, and Moe point those toys [referring to their disruptor rifles] someplace else". Lampshaded when one of the Mauve Shirts with her wonders where in the heck Eleya, a Bajoran, heard of The Three Stooges. Eleya continues to refer to the trio of mooks as Larry, Curly, and Moe for the remainder of the chapter.
Eleya: Academy roommate was a fan. Her payback for me dragging her off to a Serenity screening.
- 1986's Stoogemania is chocked full of Stooge gags, with the main character Howard F. Howard, who starts seeing the Three Stooges wherever he goes, and even wanders into the neighborhood of Stooge Row, located between the fictitious "Shet Up St." and "Nyuk Nyuk Blvd." In order to fight the epidemic, the Stooge Hills sanitarium is founded, and after everyone has graduated and is cured, they decide to play a few of their shorts, and everyone comes to acceptance and still enjoy the Stooges' comedy. The main character Howard F. Howard is a reference to Moe's, Larry's, and Curly's last names of Howard, Fine and Howard, as well as the recurring phrase spoken over the intercom in 1934's "Men in Black".
- In Baby's Day Out, the three villains may as well have been named Curly, Larry, and Moe.
- In the 1981 film Gas, a gas station attendant who is being interviewed by a news reporter does his impression of Curly Howard for the camera.
- In Pulp Fiction, when Vincent takes Mia to Lance's house after she overdoses on heroin, Lance is watching The Three Stooges short "Brideless Groom" and Emil Sitka chants his famous line, "Hold hands, you lovebirds."
- In Life Stinks, Goddard Bolt (Mel Brooks) and the J. Paul Getty bum (Rudy De Luca) get into a slapstick scuffle about which one of them is richer.
- In Short Circuit Number Five after outwitting and powering down three of the same model robots sent to capture or disable him reprograms them to perform a Three Stooges routine and leaves them to be found by Nova's (the company trying to recapture him) team.
- The 2012 film "The Three Stooges" is a remake with new actors playing the trionote .
- The three trolls in Peter Jackson's The Hobbit bicker in a similar manner to the Stooges.
- In There's Something About Mary, Ben Stiller's character attempts to do one of Moe's eye pokes on his dog, only to be paw-blocked like Curly would do.
- "Calling Doctor Howard, Doctor Fine, Doctor Howard" can be heard over the intercom at a hospital in Inspector Gadget.
- A Song of Ice and Fire contains a trio of One-Scene Wonder characters named Lharys, Kurleket and Mohor, confirmed by Word of God to be a tribute to the Stooges.
- George and Harold of the Captain Underpants books attend Jerome Horwitz Elementary School. Now why anybody would name a school after Curly is beyond us.
Live Action TV
- MadTV: The Three Stooges are spoofed as paid assassins along with David Faustino as their target in a parody of Menace II Society. The sketch featured Orlando Jones as Curly, Debra Wilson as Larry, and Phil LaMarr as Moe.
- That '70s Show: An episode features three of the characters acting out an imaginary Three Stooges short called "Pie Guys".
- In the Seinfeld episode "The Suicide". the foreign woman Jerry is seeing asks him who the Stooges are and he promises her that he will "show her the Stooges".
- SCTV had John Candy who did a dead-on Curly, teaming with Eugene Levy as Moe, and Joe Flaherty as Larry (also seen in the one-man show 'Give 'em Hell, Larry')...Candy would also incongruously play Curly as the lead in 'Ben-Hur'.
- The Pretender had a few:
- During the first season, Jarod discovered The Three Stooges for the first time, sitting in a diner. He later makes a video of himself doing Curly's schtick to taunt Miss Parker.
- In the second season premiere, Jarod was posing as a medical school professor named Dr. Howard. One of his colleagues was Dr. Fein.
- In an episode of Night Court, Bull decides to get a toupee. While browsing a catalog and passing over more expensive toups (such as the "Shatner Turbo 2000"), the salesman suggests one of their economy hairpieces: the "Shemp."
- In one Christmas episode of Home Improvement Tim is getting ready to set up his usual over the top holiday decorations when he is told that there are new rules for the contest this year. Namely, that the three wise men of the Nativity must be the actual three wise men, not the Stooges.
- One of the later episodes of Mash has Major Winchester forced to teach western medicine to three Korean doctors that he condescendingly refers to as "Larry, Curly, Moe".
- One episode of series/Roseanne had a character wear a halloween mask of The Stooges, and does the "Spread out!" gag with it when walking out the door.
- Happy Days: When the fight between Richie, Ralph and Potsie against some greaser bullies commences (episode "Joanie's Weird Boyfriend"), Fonzie comments to Carmine Ragusa "Didn't we see this in a Three Stooges film?"
- The beginning of "Weird Al" Yankovic's music video for "Like a Surgeon" has Al in scrubs walking down a hospital corridor. A woman's voice on the P.A. system says, "Dr. Howard, Dr. Fine, Dr. Howard."
- "The Curly Shuffle," by the Jump 'N' the Saddle Band.
- Rubber Chicken Films did a parody of Young M.C.'s "Bust a Move," entitled "Bust a Stooge" 
- On some of their tours, Rush would have the Three Stooges theme play right before they go on stage. Can be seen in the Grace Under Pressure Tour video.
- Former conservative Christian talk show host Allen Hunt used to compare Barack Obama, Eric Holder and Janet Napolitano to the Three Stooges.
- Near the end of Quest for Glory I you can infiltrate the brigand's hideout. One of the encounters you must deal with is a trio of brigands based off of the Three Stooges, complete with their catch phrases. You ultimately defeat them with a series of your own slapstick actions.
- Not only do the names of a trio of bosses in the international versions of Final Fantasy VI, Laragom, Moebius, and Curlax, sound very similar to the names of the Stooges themselves, but the trio even goes as far as to call themselves "The Dream Stooges".
- In fact, they were explicitly called Larry, Moe, and Curly in the original US release, Final Fantasy III. However, they're simply called The Three Brothers of Dream: Sogno, Sueño, and Rêve note in Japan.
- While Batman is wandering around Arkham Asylum in Batman: Arkham Asylum the Joker will frequently quote the Stooges short "Men in Black".
Joker: "Calling Dr. Howard, Dr. Fine, Dr. Howard."
- A clown named Laurence "Moe" Curls appears in Phoenix Wright: Ace Attorney.
- Diablo 3: There is a set of three unique skeletons named "Moek", "Larel", and "Karel" that spawn during one particular quest. There is an achievement for killing all three brothers in one blow called "Nyuck, Nyuck, Nyuck".
- In the comic Modest Medusa, the titicular character often makes Curly's "woob woob woob" sound when fleeing a scene where she's caused trouble. note
- An episode of MTV's Celebrity Deathmatch featured the Stooges being brought to the present age via a time machine invented by Stone Cold Steve Austin to battle The Three Tenors. The Three Stooges (or, to be more specific, Curly) won.
- Looney Tunes: In what is probably the earliest shout-out. the Porky Pig cartoon Wholly Smoke (1938) has three cigars resembling the Three Stooges rise out of a cigar box and each one gives him an eyepoke.
- Another Porky short, Porky in Wackyland has a three-headed human like character with similar haircuts for each head who fight with itself in a similar way.
- Porky's Hero Agency as Medusa turning three short versions of the Stooges to stone in the positions of "see no evil, hear no evil, speak no evil."
- Hollywood Steps Out shows caricatures of famous Hollywood actors of the time, including the Three Stooges poking each other's eyes in tune to the music.
- King of the Hill: The episode "A-Fire Fighting We Will Go" contains several references to the Stooges.
- "Uncle Grandpa: In the "Prank Wars" episode, three of the contestants at the Pizza Eating Contest look like Moe, Larry, and Curly.
- South Park: In the episode "Hell on Earth 2006" features notorious serial killers Ted Bundy, Jeffrey Dahmer and John Wayne Gacy sent to Earth to get a cake for Satan's party. They start fighting each other in typical Three Stooges fashion. The title card even spoofs the ones from their shorts.
- The Simpsons:
- In "Bart the Daredevil", Dr. Hibbert says a lot of children imitate violence they saw on TV: "I won't even subject you to the horrors of our Three Stooges ward."
- Homer watches them on TV in "Homer the Heretic" and chuckles: "Moe is their leader."
- In "Duffless", Bart tries in vain to touch an electric buzzer with being electro shocked. He imitates Curly by saying "eeeh, certainly...nyak nyak nyak" and imitates Moe by saying "...a wise guy eh?...."
- In "Bart's Comet", Skinner shows Bart the star sign of the Three Wise Men. In Bart's imagination he sees the Three Stooges in the sky.
- In "Treehouse of Horror IV", Bart notices vampires behind him and Lisa. He starts making sounds that Lisa mistakenly believes to be imitations of Shemp and Curly.
- In "Last Exit to Springfield" and "Deep Space Homer", Homer walks sideways on the ground making "Woob Woob Woob" noises, as Curly used to do. A bomb in the Schoolhouse Rock parody in "The Day the Violence Died" also makes this noise.
- In "This Little Wiggy", Nelson imagines himself weighing the brains on the Three Stooges.
- In "Sunday Cruddy Sunday", Homer, Wally and Chief Wiggum run away from Rupert Murdoch in typical Stooges fashion.
- In "The Mansion Family", the doctor diagnoses Mr. Burns with "Three Stooges Syndrome", meaning that he has a multitude of medical conditions, but because they all cancel each other out, they can't harm him. The doctor likens the situation to The Three Stooges all trying to go through a doorway at the same time.
- In "Large Marge", former presidents Jimmy Carter, George H.W. Bush and Bill Clinton paint a house and start creating havoc à la The Three Stooges.
- In "Mr. Spritz Goes to Washington", Homer and Bart are watching a very late episode of The Three Stooges where the comedians are in old age.
- In "Simpsons Christmas Stories", the Three Wise Men behave like the Three Stooges.
- In "Boy Meets Curl", the National Curly Trials are seen with everyone practicing to be Curly Howard. Moe Szyslak then says: "Wise guys, eh?" and slaps a long line of Curlys.
- In "The Ten-Percent Solution", the Museum of TV and Television has a display of the Three Stooges' skeletons, with Curly's bones in a box.
- Futurama: Doctor Zoidberg makes Curly's trademark "whooping" sound when "evading enemies" (sometimes after squirting ink), and sometimes makes Shemp's trademark "Heep, heep, heep" sound when frustrated.
- Mom's three sons, Walt, Larry, and Igner, are expies of the Three Stooges.
- The Ren & Stimpy Show contains several. Billy West has stated that he based Stimpy's voice on Larry Fine, though he also repeats some of Curly's and Shemp's sounds.
- Rocko's Modern Life: The title card for "Dumbbells" depicts Rocko, Heffer and Filburt as the Stooges.
- Batman: The Animated Series: In a few episodes, the Joker has a trio of henchmen who resemble the Stooges and are named "Mo", "Lar", and "Cur".
- One episode featured a villain named Dr. Milo, who also had two henchmen, with all three being expies of the Stooges.
- Jabberjaw's voice is based on Curly Howard, although he also has a frequent Rodney Dangerfield shout out, as well (namely, complaining about not getting any respect)note .
- One episode of Captain N: The Game Master sees Mother Brain, Eggplant, Wizard, and King Hippo get transformed into Moe, Larry, and Curly respectively.
- In one episode of Teenage Mutant Ninja Turtles (1987) Shredder awakens a spirit of an ancient Foot clan ninja master claiming to be the current grandmaster of the Foot clan. Splinter calls him out on this saying that Shredder does not know the Foot clan's most powerful and secret technique, the "Kur-Li Maneuver". Splinter then proves that he is a true master of the Foot style by performing the "Kur-Li Maneuver" in which he hypnotizes Shredder, paralyzing him, and then begins slapping Shredder around while doing his best Curly impression.
- Pinky and the Brain were once joined by a third mouse named Larry, resulting in Stooge-like antics.
- Scooby-Doo Meets the Boo Brothers: The three eponymous ghosts encountered by Scooby and Shaggy in this 1980s Hanna-Barbera TV special are expies of the Three Stooges.