Spoilers Off applies to all "Moments" pages, so all spoilers are unmarked.
- Chapter three, "Metal Heart", at the end where it's revealed that Dr. Light rebuilt the Mother Computer and her "son" as a park control computer, allowing mother and son to be together forever.
- The scene of Skull Man's funeral, after being accepted as a member of Cossack's family.
- In "The Greatest Enemy in History", Roll and Dive Man both feeling sorry for the Copy Mega-Man. Roll because she knows he never wanted to be evil. While Dive Man explains that Copy reminds him of Skull Man.
- Copy Mega Man, ultimately choosing to sacrifice himself to defeat Bass despite everyone pleading him not to go through with it.
- Gigamix 3 is one huge Heartwarming Moment. But in particular...
- Star Man laughing in boundless glee as he rides the Skull Satellite (carrying the few Robot Masters that will battle the Stardroids) into outer space. Even more endearing: the rest of the Fifth Numbers, on the ground, looking up at the rocket trail with undisguised pride and affection for their brother.
- The Light Numbers and all the Wily Numbers helping repair each other like a huge gathering of friends instead of bitter enemies.
- Cut Man sacrificing himself to save Rock, and his robot soul giving the latter the final impetus to overcome his Heroic BSoD.
- The flashback leading up to said sacrifice, with Wily — him, of all people — sounding distraught over the notion that Cut Man would lose everything that he was in order to serve as Mega Man's new brain.
- Pluto calls the hallucination of Skull Man a monster, to which Ring Man responds by punching Pluto through the gut hard enough to destroy him. "He's not a MONSTER! He's...my BROTHER!" More poignant is that prior to that blow, Ring Man was struggling to defend himself, but one insult to Skull Man is enough to completely reverse the Curb-Stomp Battle.
- Wily and Light collaborating to fix Rock, and Light later reminiscing wistfully about his old college days with Albert.
