These are what we call the 'YMMV items.' Things that some people find in this work. We call them 'your mileage might vary' because not everyone sees these things in the same way. This starts discussions in the trope lists, a thing we don't want. Please use the discussion page if you'd like to discuss any of these items.
Complete Monster: LOLA. She has been feeding lies to Nick the whole time, to the point that she tries to kill Vai and made Nick think that NamNar is Matthew, his dead little brother. She also orchestrated the plot by enticing Nick's brother into going to the mountains. Or so she claims.
Crowning Moment of Awesome: The protagonist breaking out of a locked, burning building, saving trainers and their Pokemon in the process.
NamNar deciding to forfeit, rather than kill his former Electabuzz. Though it really doesn't feel that way.
Die for Our Ship: Alicia suffered a lot of this when the protagonist has a crush on her, mainly from the Namnar/Hanna and Nick/Namnar fans. However, this quickly died down when she was revealled as a Lipstick Lesbian.
Epileptic Trees: In the first half, there was much speculation as to where the plot was going. Chapter 57 promptly destroyed that.
On the deviantArt account hosting the story, the author has been actively sowing seeds for these among some of the readers.
Fridge Logic: Where did the video surveillance of the prison breakout go?
Lola took care of that.
Harsheror Hilarious In Hindsight: After the protagonist gets lost in Eterna Forest and ends up back at the start, he discovers the Valley Windworks building again, and in his frustration orders Des to set it on fire. (Obviously, he doesn't.) Later on, during the Tournament art, guess how the people running the tournament decide to get rid of the first round losers? Locking them in a building and setting it on fire.
Ho Yay: Nick and the narrator for starters. Doesn't help that the author seems to encourage it via deviantART commentary.