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Mikhail will appear in some form or another.
  • The Memories of Zero you get from doing Zero's DLC in that game show what happen to Mikhail after Ending D. From the sound of it, he lives long enough to see the world go to hell. If he does appear, he won't be as innocent or cuddly as he was, yet he'll still be a bit lighter hearted than he was as Michael.
    • That's a different timeline than the one Nier takes place in.
      • Caim and Angelus crossed from Ending E of Drakengard to modern Tokyo (which is the future of Ending C of Drakengard 2, and Drakengard 2 is the future of Drakengard's Ending A), so anything's possible.
      • Neir and Drakengard's timelines are presumably parallels spinning off from the same singularity point i.e. the "canonical" timeline ending for Drakengard 3. Which means the Nier timeline is less "modern Tokyo" and more a timeline continuing on from D3 where magic faded away only to be reintroduced by Angelus and the Giant. And according the the DLC, Mikhail going on from the final ending will very likely live until the end of the world on that stream. So he should be alive in both the Drakengard and Nier timelines. He doesn't appear but presumably somewhere on Earth in Nier Automata Mikhail is out there.

The game is set in an Alternate Timeline from Nier
Not my speculation, but from discussion in a certain Let's Play. Basically, the events of Drakengard 3 affected the Nier-universe as well (since Nier itself is tied to Drakengard timeline despite being in a separate universe). As such, certain past events might be depicted differently in this game. Also, Taro Yoko supposedly said that the game will make less sense if you played other games in the Drakengard/Nier series. Time line alterations could explain this.
  • Actually, the timeline in the World Inside book makes it clear that the Nier-universe is the future of Drakengard 2's Ending C.
  • Jossed, the gestalt reports in the game match the story in Nier.

On that note, the aliens are just Alternate Timeline humans (though they may not be that human anymore).
Admittedly this was done in the first Nier but come on!
  • Jossed:If they are humans, they're clearly mutated and advanced beyond all humanity. And they're dead.

The game will question the oldest RPG cliche in the book: Saving the World.
While I am basing this on the song lyrics, it does seem like something Yoko would do.
  • Another alternative is that it once again looks at the One-Man Army trope, but to approach it from a completely different angle this time around by coming to one simple conclusion, it's impossible.
  • By ending E You can't win alone but you aren't if you're connected to the network, the song turns into a chorus to symbolize it.

One of the endings will be an Bolivian Army Ending.
While it depends on how the story is structured (Multiple Endings like Drakengard or a single ending with multiple viewpoints like Nier) I feel that there is a good chance for 2B to be faced with an overwhelming alien force and be forced to realize it is a hopeless struggle.

The players are "Living Machines" and the enemies are the "Combat Androids". Our protagonists won't discover this until they kill the last true humans
From the previews, we know that Extraterrestrials brought so-called "Living Machines" to bear against humanity. Humanity in turn sent combat androids to fight them. Pretty simple, right? Except the enemies in the preview seem pretty clunky and entirely mechanical, while 2B and her companions seem a lot more human. The obvious answer is that we haven't been told the whole story
  • Good point, but humanity also created Devola and Popola in the past, so the mystery deepens.
  • If the protagonists were created to destroy humanity by the aliens, there would be no need for this to be a secret from them. They could just be human-killing machines that want to kill humans.
  • Also, the definition of "androids" is that they look human. As opposed to the "living machines/mechanical lifeforms".
  • Jossed. Humanity is already long dead before the aliens even arrived. The androids merely fooled themselves into thinking humans are still living on the Moon and fight the machines in order to give themselves purpose.

The Living Machines have some kind of relation to the Ultimate Weapons and Emil.
Looking at the structure of the enemies, especially in the concept art. The mechanical structure has more than a passing resemblance to No. 6, and some of the enemies even wear masks similar to the one worn by the King of Facade. Perhaps the aliens that built these machines found Emil wandering in the desert after the events of Nier or something and based their machines around him?
  • Turns out that Emil's head just happens to look like the aliens'. It's possible that the research into the Ultimate Weapons happened to uncover visions of the aliens and one of the scientists decided to go with it. This does allow Emil to use Machines as an exosuit, though.
  • Not convinced it's Jossed. The Hegel machine lifeform is almost identical in design and function as one of the Emil clones you encounter. Actually it's highly likely that the aliens created the machine lifeforms by reverse-engineering the Emil clones, as the Emil clones are depicted fighting the aliens themselves rather than machine lifeforms in his story.
  • Emil fought the aliens when they first arrived, even copying himself to make an army. The machines are very likely based on his appearence, as their biggest treat among the earthlings.

Humanity has passed by the time the plot kicks off.
That's why the fight is ultimately futile. The machines like 2B have no more reason to fight, and the machines that are invading have technically won since everyone's dead.
  • Partly Confirmed. Humans went extinct long before the aliens actually invaded.

The reason the fight is futile is that the Cult of the Watchers is regaining their foothold on Earth.
At 0:47 in the TGS 2016 trailer, a man with white hair and red eyes is shown with a dark tattoo creeping over his skin, and part of that tattoo has the design for the Three-Eyed Twins - the symbol of the Cult of Watchers from Drakengard. So it doesn't matter if the YoRHa or the aliens win, the victors are going to have to deal with giant demon babies with teeth.
  • Alternatively, it could be a flashback to the Crusades that occurred in NieR's backstory, where the Legions (victims of the forced pact known as White Chlorination Syndrome) were led by a being known as Red Eye.
  • Terminal A and B have a starkling resemblence to Manah, so this might be intentional.
  • Jossed. One of hte Q&A reveal the Red Eyes of the Machines is connected to the Red Eye Disease, but the Cult of the Watchers Tattoo was something Adam and Eve learned about from reading human records. Adam insists that Eve adds it to himself, and when Eve loses control the tattoo loses all shape because it's a fake.

In keeping with the WWII parallels...
The game will end with untold levels of destruction as a parallel to the nukes. But what will cause it all? My guess, The Moon.
  • Jossed

While irrelevant to the main plot (and probably everything else)...
Eve is intersex just like Kaine read: has a vagina pertaining to the origin of his name, and as a Mythology Gag to the first game.
  • Jossed. Adam and Eve have Barbie Doll Anatomy. You get to confirm this during their first disturbing boss fight.
Taro Yoko definitely means it when he says this game will have a happy ending
It'll be a big case of "I Told You So" considering his track record.
  • Confirmed

There will be other Expies of Drakengard/Nier characters
Since A2 is basically one for Kaine/Zero, there would at least be one who's either mute or just a man of few words who goes violence first, more violence second, like Caim. The Nowe expy would just serve to try and be badass only to get killed off easily.

The stage play is canon
A2 is the surviving No 2, who has become embittered by the results of her mission and the Bunker's treatment of androids.
  • It is already well established that it is indeed canon.

The YoRHa and the Bio-machines will turn out to be not so different
.And they will realize this and put aside their differences as they rebel against their creators.
  • Confirmed. It's revealed that the androids are in fact built from reverse engineered machine technology.

Adam and Eve are good guys... sort of.
I think they are YoRHa androids that are in reality rebelling against humanity. They used to have regular android names in the past but changed them to symbolize them casting of their past selves. They took the names not only to symbolize that they where the first to truly do this, but also to symbolize that they posses forbidden knowledge, and it is here their moral standing comes in. They are most likely using that knowledge to try and free other YoRHa from the thrall of humans, whether they want to or not. There is also the possibility that they might be somewhat extreme in their methods leading to further friction. And another possibility is that they just "think" they are free, but in reality just managed to change who is holding their strings.
  • Jossed. Adam and Eve are machines that have managed to take on human form, and are generally antagonistic towards the androids. However, they do have a genuine fascination with humans and hold no ill will towards the androids when they leave Earth in Ending D.

The reason why Adam offered to let 9S join the machines in the ark
:

My theory, at least, is that Adam noticed a lot of similarities between not only himself and 9S, but also between Eve and 9S. 9S' behavior during Route D/E was endearing to Adam because deep down, Adam was reminded of Eve. After all, Adam has made comparisons between himself and 9S before—both driven deep down by hatred. However, 9S reacted very strongly to 2B's death, almost similar to how Eve reacted when 2B killed Adam. It might explain why Adam regarded 9S so fondly on the ark; Adam could look after 9S the way he could with Eve, since 9S would be helpless without Adam if 9S joined them on the ark.

  • Conversely: 9S interests Adam but Eve has nothing to do with it. Adam considers hatred to be the core of humanity; to be considered a worthy successor to humanity, he must demonstrate his human-ness. 9S's Roaring Rampage of Revenge against A2, however futile, proved him worthy of hitching a ride on the ark.

The future game or DLC would be about the aliens
I mean they have no depths compared to anyone and were ignored by their machines. They are bound to have a tragic backstory.

The aliens came to Earth because of the Cataclysm of 2003
Why else would aliens invade some random, dying rock in the backwater of the galaxy? Their attack machines use standard mana orbs as bullets and they seem to have an obsession with the Watchers, indicating a connection with the outer realities. Most likely, they're there to research / harvest the materials that caused the White Chlorination Syndrome, but what should have been an easy colonization attempt was rebuked by thousands of psychotic androids.

Nier 3 will be a Prequel like Drakengard 3 and cover the story of the Legion's and Red Eye 2! defeat. And show how Replicant's began to developed personalities of their own.
The finale and true defeat of the Legion was never really elaborated on and considering the impact it held on the series. it would be surprising if no game was made which covered those events.

The quest giver of Treasure Hunt at the Castle
Perhaps the reason why the quest giver became 'weird' is because of the parts The Forest King gave to him, as it is shown many times throughout the game that the machine doesn't have complete understanding of their own 'biology'.

Adam and Eve actually do have genitals
They refer to "covering their crotches", which doesn't specifically state that they have genitals, but it does imply they have something on their crotch to cover up. They just appear with Barbie Doll Anatomy due to either censorship and/or to stop the player from getting too distracted during the naked battle.
  • Given how much of a pretentious windbag Adam is, he's more likely doing it (and making Eve do it) in order to ape what he's learned of humanity from the Bible (hence his comments about gaining great wisdom from fruit), without really understanding the reasoning behind it (while thinking he does).
  • Possible. Yoko stated that although Adam, Eve and the androids are 'born' without them, they are capable of growing out genitalia that can even produce semen and even change their sex at will, although they will never be able to properly reproduce. Given how highly they idolize humans, it is safe to assume they had formed genitalia by the time they start wearing undergarments.

Accord is around, but doesn't interfere because nothing would affect other timelines.
She's The Ghost who gets name-dropped, and her hobby of weapons with stories are floating around. But because the worst that could happen is machine / android extinction that doesn't spread beyond the dimension; everything is considered contained.

9S spends most of the C & D acts (and perhaps part of the B route) experiencing PTSD as a result of remembering 2B's actions in previous saves.
It's a pattern I noticed within the context of his actions in the C and D routes. While a lot of his behaviour be explained as grief, not all of it can. The symptoms of PTSD include the following:
  • Self harm and self-destructive tendencies
  • Seeking out high-risk/dangerous pursuits
  • Intense physical reactions to reminders of the event
  • Loss of interest in activities and life in general
  • Sense of a limited future (you don’t expect to live a normal life span, get married, have a career)

Of course these are also all common symptoms of various trauma-induced problems. So why do I say PTSD specifically, when these symptoms could have more immediate causes? Mostly, it's his reaction to the clones of 2B in ending C - he brutally murders all of them, and expresses gladness at being able to do so- but this is after he bursts into tears at the sight of them, and he still clearly experiences affection towards them.

If he retained or somehow regained memories of 2B killing him repeatedly (we don't know how many times she did it, but it's highly likely it was more than we saw) - that means he has repeated memories of what is, essentially, his own murder -and he reacts towards the cause of that with the kind of grief that has been observed in many victims of abuse. This is particularly common in people after the death of their onetime abusers, when there is no longer a place to direct any (perfectly justified) anger they feel. It is, essentially, a form is Stockholm Syndrome, and 2B's image induces feelings of Post Traumatic Stress -aka the intense physical reminders of the event. If he in some way were aware of what she'd done, that would push his reactions from basic grief, to a form of Stockholm Syndrome.

(NB: This is not saying 2B is an abuser, because she's not. Her behaviour and the reasons for it do not fit the pattern that would indicate an abusive personality, but the results are the same - the sense of deep betrayal and anger towards your attacker, combined with a deep seated, psychologically induced affection for them, is common in many toxic relationships).

The androids built the city that the games takes place around sometime after the first game.

Likely as a memorial to humanity.

To explain, there were hardly any ruins of the modern age left by the time of Nier. Millennia after that, and you'd need a university of archaeologists just to argue about where they used to be. Additionally, the city ruins are intact enough to recover fragments of magazines, and paper is not going to last that long, not out in the open.

Well, not paper that was mass produced for a disposable edition.

After humanity went extinct, the androids needed to do something to serve their masters. Humans may be gone, but the androids could still try to keep them from being forgotten. So, a city, modeled after the ones the humans made at the height of their power, but built to last forever. Or at least through an alien invasion.

The YoRHa Androids are dressed the way they are because of anime.

When the YoRHa Androids were being designed, their creators accessed human historical data for reference and found various anime series and ended up with what we see in the game.

Ending E is just as much of a lie and a scam as the Yo R Ha itself; you have been fooled, just like the main androids.

The shoot 'em up section in the Ending E credits is known to be designed to be unbeatable without help from other players. This means that, unless the developers had a shmup wizard clearing it alone over and over with different accounts, they placed some arbitrary initial helping accounts. In other words; your help never mattered: there were false accounts who could do what you did without any effort — made so that you would sacrifice your account for a greater purpose, which in reality is a lie, not unlike the Yo R Ha and the war aganist the alien machines. The true purpose of Ending E is to show that you, the player, are just as gullible as the Yo R Ha, and all the players proud of their savefile deletion are proof of that. (Which by the way, includes me)

  • Jossed. Some people who could not play the game online were forced to finish it without any help. That also meant no prompt to erase their files, however.

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