Mike using the Saved by the Bell Zack Morris Time Out is a callback to an episode of Cracked After Hours that aired the day before the Agents of Cracked episode.
Michael receives a phone call and guesses that the person on the other end is "Clippy". Clippy is the sidekick (consisting of video clips that follow a theme) of Michael's android persona in "Cracked TV" and "Does Not Compute".
Homeland Scarecurity is Based on an incident wherein DOB was visited by the Secret Service after writing an article about kidnapping the president's daughter.
The Danza: Both Swaim and DOB are named after, well, Michael Swaim and Dan O'Brien.