Why has a supermarket got a peanut-firing tommy-gun(?) under the counter?
It's my understanding that most store clerks keep guns under the counter in case of robbery or something. Jake just shoved a can of peanuts into the firing chamber.
If Chieftain and the Divas are better, more experienced agents, why is every stage harder if you play as them? Wouldn't it logically be the other way around, where Spin and J would have a more difficult time due to not being as skilled?
Think of it as the more experienced agents get more difficult missions.
Which doesn't make that much sense since they're the same exact missions the agents go on.
If Colonel Bob did dig through the earth, why would he have ended up in New York?
He didn't dig through the Earth - it's just stated that he dug a long tunnel. If he did dig straight through the Earth he would have been burnt to a crisp by the heat of the core anyway. Besides, that was before he had the machine that could dig through "even the toughest ground", so likely he wouldn't have been able to dig right through the Earth anyway.
There's one bit of Fridge Logic that has been recently discussed: In the Downer Ending for "A Christmas Gift," it flashes forward 10 years into the future to a very desperate Lucy. Problem is, the Rhombulan invasion takes place shortly after you get the good ending for the level, and Lucy's hope was what started the Clap Your Hands If You Believe intro. So what did happen to the Rhombulans in the bad ending?
How do the agents follow Sam while dancing?
Why don't the zombies attack the agents?
Because they're too busy worrying about the guy shooting peanuts at them.
Maybe the destruction of the Rhombulan's mothership somehow reversed the effect.
And even if not, the Elite Beat Agents were turned into stone too, and were revived. If it was done once, it could be done again, especially given the crazy universe EBA is set in, and how effective the EBA are.. At worst, the petrified people will have to wait a few days before being rescued by EBA tying up the loose ends.