Invoked in Gunnerkrigg Court: to scare Paz, Mort creates an illusoryCircus of Fear, where all the mannequins are missing their eyes. Except for the clown, brandishing a rusty saw, who says (in Spanish) "What lovely eyes you have, Paz. Will you give them to me?"
Zimmy and Diego's eyes are commonly mistaken for no eyes at all when they're really a shadowy sort of blockage which is possibly meant to be from her little Crapsack World.
Used to distract Jer'kol by Ariel to allow Kormaril to strike at him in this strip of Drowtales. He got better. His eye did not, and Ariel finished him off the next time he tried to kill her.
Abbey in Gnoph usually goes for the eyes first when fighting, with gory results. Three examples here, here, and here.
Matoya: I'll save you from the gruesome details, but suffice it to say that when a demon comments that he'd like to see things through your eyes, he's not speaking metaphorically.
And then there's this little gem:
Red Mage: Wait, you murdered your own blind brother?
Black Mage: It would have been cruel to let him live after what I did to his eyes.
Eyes are lost pretty often: Aardy, Chisulo (on purpose, no less, by Tagon), and Captain Tagon himself. Nano-surgery and rapid regrowth makes it a non-serious injury, though.
What's even more astonishing is that this is not Dan McNinja's first inversion of this trope, nor is it his last.
How Sul lost his eye sight in Kiss Wood. After setting his house on fire, he realises Ro (a butterfly) is trapped in the house. He goes in to rescue her, but gets stabbed/burnt in the eye by a burning piece of wood that falls from the ceiling.
O-Chul broke out of his cage at an opportune moment and used one of the bars to take revenge on his torturer, Redcloak, by shoving it through his right eye. (Even better, had Redcloak not teleported out of the way first, it seems like◊ O-Chul wasn't going to stop with the eyes...) This parallels Start of Darkness, in which Redcloak's younger brother lost his left eye when paladins attacked their village. While Redcloak can heal said wound, Xykon forbids him from doing so as a reminder of his failure to properly protect his Phylactery.
Eagle-Eye Pete learned that it was a bad idea to choose a nickname based on something he couldn't afford to lose. Twice.
Lacking anything else to use as a weapon at the moment, Roy smashes the phial of the healing potion he just chugged down into Thog's eye. Even a raging Barbarian can't shrug off broken glass in the eyes.
Also, Rose attacks an ogre in the eyes with knitting needles, blinding it. Then uses the yarn as reins and rides it.
Her alpha counterpart does the same to Guy Fieri. It's a tad bloodier this time.
We eventually learn how Terezi was blinded: mind-controlled to sleepwalk outside and stare into the sun until her corneas burned out.Fridge Brilliance: Pyrope means "fire-eyed".
String Theory has Dr. Schtein, who had his eyes melted out of his head by a plasma burst in an experiment gone terribly wrong; however, he receives working red-on-black prosthetics. Schtein is still unhappy about his appearance, though.
Schtein: The only thing that happened to me is a plasma arc burnt the front of my face and melted my eyes out of their sockets.
Matt from Murphy's Law fires an arrow into a dragon's eye.
In chainsawsuit, a man gets a popped champagne cork in the eye here.
Our Little Adventure Example: A female imperial mook the group was fighting in this comic gets shot by Julie in the eye right after this mook lost her arm.
And in one of the later battles against an Angelo Kid, this magician casted blindness on Angelika. Instead of something traumatic happening to her eyes, they completely disappear from her face.
Poor, poor, Liam. and it was done by the Spy who replaced Gabry, his lover.
Suicide for Hire: A (rather doped-up) man loses an eye after receiving a lap dance by a stripper with implants. No, really.
In Digger, it's mentioned to be a "kindness" to sew shut the eyes of acolytes who display second sight, possibly so they aren't constantly trying to untangle it from their first sight.
In Prophecy Of The Circle, one of the tekk gets a spear thrust into its eye. We don't see the impact, but the aftermath — half of the spear's shaft stuck between bloodied eyelids — isn't too pleasant.
UNA Frontiers: Cyberna is troubled by recurring visions of a woman with gouged eyes, which come from the carried-over memories of the woman whose brain patterns served as her personality template.
