* HoYay: Aside from the [[OfficialCouple canonical]] Simon/Jeremy, there's some subtext between Nate and Johnny in ''With A Bullet''. WordOfGod says it was deliberate.
** [[spoiler: Word of God also ships Tesseract/Link - you know, those guys from the [[strike: Blowing Shit Up]] - on alternative Thursdays - the Not Blowing Shit Up Division-- ah, the Bomb Disposal Squad.]]
* NoYay: [[spoiler:Surprise!Nate/Farraday in ''Frantic''. [[{{Squick}} Augh!]]]]
** Also invoked by Simon in ''High Fidelity'', immediately [[{{Squick}} squicking]] himself out.
-->'''Simon:''' Hell, some days I'm half-convinced [[spoiler:Rich sold Archer out to Karpol]] out of sheer jealousy [[NauseaFuel oh God]] [[{{Squick}} that's so gross]] [[BrainBleach I don't even want to think about it]].
* {{Squick}}: Pretty much all of Jeremy's childhood, up until he's taken in by Ethan. And even then, there's the thing with [[CainAndAbel Bran]]. [[LampshadeHanging Lampshaded]] by Sandra, who used to work in the Sex Crimes division.