Here are just some of the many references ''We Are All Pokèmon Trainers'' has made to other works.

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* [[CloudCuckoolander Goggles]] at one point pulls out a disintegrater gun from out of nowhere and tries to use it to destroy a Stunfisk. [[WesternAnimation/DuckDodgersInTheTwentyFourthAndAHalfCentury The gun disintegrates.]]
* Einroth is a shout out to both VideoGame/FinalFantasyVII's Sephiroth and ''FanFic/ThoseLackingSpines's'' Jeffiroth.
* There are several shout outs to WesternAnimation/MyLittlePonyFriendshipIsMagic... err, My Little Blitzle in the earlier arcs.
* ''Webcomic/{{Homestuck}}'' shout outs: [[MemeticMutation They keep happening.]]
* PEFE HQ in the AU is one giant shout out to VideoGame/{{Portal}} and its sequel.
* The entire Goldenrod Nidoran Colony is a shout out to WesternAnimation/WatershipDown with their language and religious system transplanted from the book.
* Rourke’s mons are called [[Literature/TheHungerGames Thresh, Marvel, and Rue.]]
* The Angela of PMD-B is based on ''Franchise/{{Fallout}}''.
* Many videogame products or franchises are referred to by alternate names, such as "''[[VideoGame/TheLegendOfZeldaOcarinaOfTime Grasswhistle of the Eons]]''". There's a full list [[https://waapt.wiki.tropi.us/wiki/Brand_Names here]].
* All of Bastion’s mons are named after video game characters. So far, his mons are [[VideoGame/{{Overwatch}} Genji]], [[Franchise/SuperMarioBros Mario]], [[VideoGame/SonicTheHedgehog Sonic]], [[VideoGame/Portal2 Wheatley]], and [[VideoGame/{{ARMS}} Misango]].
* The entire [[VideoGame/KirbysReturnToDreamland Return To Dreamland]] arc is a ShoutOut to...yeah.
* A sideplot in the AU [[VideoGame/PokemonRanger Haruba Desert]] shows that the place has become [[VideoGame/PaperMario64 Dry Dry Desert]].
* Dune's team includes Pokémon named [[Franchise/{{Disgaea}} Laharl, Flonne, Etna, and Champloo.]] He also has Pokémon named [[Anime/TheBigO Big Dom]] and [[VideoGame/AceCombat Garuda]].
* Deziree, on top of being a visual {{Expy}} of [[WebComic/GirlGenius Agatha Heterodyne]], has Pokemon named [[FanFic/GloriousShotgunPrincess Wuffles]], [[WesternAnimation/PhineasAndFerb Doofenshmirtz, Norm]], [[VideoGame/FalloutNewVegas DOCTOR MOBIUS!]], and [[VideoGame/FinalFantasyXIV Cid]].
* The Geographic Society is based on Magazine/NationalGeographic. It's publication arm, however, is a shout out to the Daily Bugle from Marvel Comics, albeit given a science journalism flair. DaEditor [[ComicBook/SpiderMan Hank Harvey is J. Jonah and Penelope Grant is Betty Brandt]].
* Tommy and his alter ego, meanwhile, are [[Franchise/MarvelCinematicUniverse based on a certain incarnation]] [[ComicBook/SpiderMan of an arachnid-themed dorky superhero]]. [[ExpyCoexistence Try telling him that, though.]] His presentation style for his science webshow is patterned after [=YouTuber=] WebVideo/MarkRober (albeit by way of Creator/TomHolland).
* Since April 2019, Shutter/Gavin has bonded with a muk and became an expy of [[Film/Venom2018 Eddie Brock]].
* Aline going [[https://tvtropes.org/pmwiki/posts.php?discussion=12971269370A74820100&page=17276#431885 Hoenn confirmed.]]
* A pair of twins named [[Music/EvilliousChronicles Rillianne Lucifen and Allen/Alexiel Avadonia]] are introduced.
* Milagros' Persian, Baby Cat, is named after one of ''WebAnimation/TheOdd1sOut'''s cats.
* Yukari's Pokémon:
** Her Charcadet and Ceruledge are named [[VideoGame/RuneFactory4 Kiel and Forte]] respectfully.
** Yukari's Scorbunny is named as [[VisualNovel/DanganronpaV3 Kokichi]].


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