The Turtles have escaped Bishop's lab, but now they must find and rescue Professor Honeycutt, before it is too late...

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!!This episode provides examples of

* BatmanGambit: Professor Honeycutt tricks the Federation into scanning his brain for the weapons plans he's erased, only to find that he's erased those plans. What ''is'' inside his memory banks is a virus that lets him broadcast a worldwide message condemning the two opposing sides and apologizing to the people of Earth for placing them in danger before he starts disabling every warship in broadcasting range.
--> '''Honeycutt:''' You've opened your entire mainframe to me, I'm inside the system. I ''am'' the system.
* BittersweetEnding: The war between the Federation and the Triceratons is over, but [[spoiler: it (seemingly) cost Professor Honeycutt his life.]]
* BurialInSpace: [[spoiler: Professor Honeycutt]]
* DamselOutOfDistress: Mikey frees himself from Bishop.
* {{Narrator}}: Bishop, for the first time.
* HeelFaceTurn: Mozar and his men drop their weapons and allow the rebels to arrest Zanramon, refusing to gun down their own kind.
* HoistByTheirOwnPetard: Blanque is defeated after Honeycutt turns his own tech against him. After all, Honeycutt is responsible for designing most of the technology.
* MadeOfIron: While freeing Leatherhead, Mikey expresses his relief that he's alive, seeing as how the Turtles' old lair collapsed on him. Leatherhead chalks it up to having an impressive hide.
* OneManArmy: Discussed.
-->'''Splinter''': You are outnumbered!
-->'''Bishop''': Perhaps, but never outclassed.
--> '''Honeycutt:''' You've opened your entire mainframe to me, I'm inside the system. I ''am'' the system.
* TheRevolutionWillNotBeVilified: Traximus and his men march into their dictator's command center as he prepares to slaughter his defenseless enemies. They place the groveling tyrant under arrest as his own soldiers offer no resistance. Traximus then destroys Zanramon's throne to symbolize the Triceratons' return to republicanism. 
--> '''Zanramon:''' How did these traitors get in here?
--> '''Traximus:''' We walked! Now throw down your weapons.
* WeWillMeetAgain: Bishop says this before leaving the lab.
-->'''Bishop''': Until we meet again, and we ''will''. Count on it.
* VillainExitStageLeft: Bishop's exit. The Turtles decide to let him go as they have more important things to do.
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