* Anything having to do with [[LightNovel/FullMetalPanic Bonta-kun]]
* Blessfield has Shihomi and Carret throw salt at the monitor to ward off the "Evil spirit" after a deal with [[Anime/MartianSuccessorNadesico Prospector]] ends up costing him the money he had just made on the mission.
* In Mission 25, if [[Anime/{{Golion}} Sinclyine]] engages a unit with a female pilot (and he usually goes after the ''Nadesico''), he gets chewed out by the every female on the team.
* In the NewGamePlus version of episode 32, Hikaru ropes several of the boys into helping her finish her manga. Hayato notices that Sōsuke's shading consists of endless repeats of the message; "I wanna get out of here" in Morse Code.
* The game takes a six-month TimeSkip halfway through that also encompasses the ones taken in many of the component series'. The lengths of the originals varied between a few months to ten years in their original canons, which are naturally handwaved away in the game. This means, however, that little Ruri-ruri develops the equivalent of ''three years'' in one hell of a growth spurt.

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