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1!All spoilers are unmarked [[Administrivia/SpoilersOff per wiki policy]]. Read only at your own risk. Administrivia/YouHaveBeenWarned!
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3* There's something oddly melancholy about the show's [[https://www.youtube.com/watch?v=4Olt4BVB4zY closing theme]]. It's a slower-paced version with an emphasis on regal-sounding brass, as though it's some sort of wedding or funeral procession, until about halfway through when the rest of the "ensemble" kicks in with a nearly heavenly sound before closing with the familiar "twang" of the original theme. Especially if you're a fan of the show, it's likely to bring a tear to your eye.
4* In the final episode of Season 10 ("Danger: Diabolik"), while using a joystick to control the Satellite of Love, Pearl accidentally breaks the control and sends the SOL spiraling down to earth. Realizing that all of her experiments have failed, and there's no way to continue, she has a massive VillainousBreakdown, throwing her rage around the castle, knocking Bobo unconscious, and even terrifying Brain Guy (who responds to the breakdown of his boss by looking at Cambot in fear). When we cut back to her, her mascara has streaked down her face in tears, and the actress playing her really does look like she's upset about the series ending.
5** WordOfGod: Both Mary Jo Pehl and the rest of the crew all confirmed that she was hit the hardest by the cancellation. She also did the final ever filmed scene of the series, when she (cruelly) is forced to tell Mike and the bots, "[[BlatantLies Look, Nelson, MOVE ON. I am.]]"
6** The final shot of Mike, Crow and Servo riffing a bad movie, this time at home, with no one forcing them to. UsefulNotes/StockholmSyndrome? Maybe, but WordOfGod said that they were simply emulating what ''everyone'' does during a bad movie. And of course, realizing it's over.
7*** Gypsy at least becomes the CEO of [=ConGypsCo=]. Mike and the 'bots were offered shares, they passed[[note]]'''Crow:''' If you recall, ''I'' made a fart noise, which she only ''took'' as a "no".[[/note]], which is why they're living in a the basement apartment of an efficiency in Wisconsin. They still think it's "sweet living".[[note]]Well, it ''is'' right on the bus line.[[/note]]
8* Despite the disturbing lyrics, Forrester's [[https://www.youtube.com/watch?v=3PODneWdJx8 "Who Will I Kill?"]] song after Frank ascended into Second Banana Heaven is a huge one.
9** Before Dr. Forrester sings his song he’s seen walking around Deep 13 asking Mike and the Bots where Frank is, and unlike other times where he’s asked them anything in an annoyed tone, here Dr. F sounds worried, like a lost child trying to find his parents. It’s one of the rare times in the show where the audience sees Forrester at his most vulnerable.
10** This gets a CallBack in the Turkey Day '95 segments: when Dr. F. realizes Frank had invited the guests to the Thanksgiving dinner before his ascension, without even telling him, Dr. F. [[SayMyName angrily screams Frank's name in the air]] before immediately breaking down, showing that he still hadn't gotten over that loss.
11* Basically, any time Joel, Mike and the bots come close to being utterly ''broken'' by a film. Examples include ''Manos'', ''Hobgoblins'', ''Red Zone Cuba'', ''Invasion of the Neptune Men'', ''Monster a Go-Go'', and the most severe example of the film nearly breaking them, ''Castle of Fu Manchu''.
12* Joel going away in ''Mitchell''.
13-->'''Joel''': [[Film/TheWizardOfOz I'm sorry, I can't come back! I don't know how it works! Goodbye...]]
14* The short "Film/CatchingTrouble", about a man named Ross who hunts down and captures wild animals for zoos and to sell as exotic pets. Seeing the animals crying out in fear as Ross manhandles them, throws them into sacks, and drags them away from their homes is really heart-wrenching, even with riffing.
15* In the final host segment of ''Santa Claus'', Mike exits the theater alone and starts singing ''I'll Be Home For Christmas'' softly to himself. This was not too long after Mike had been trapped in space and in that moment you realize the reality of being away from his family during the holidays is really getting to him.
16* Servo's song from "Gamera", [[https://www.youtube.com/watch?v=TFN7WmmBc8k Tibby, Oh Tibby]], though played for laughs, can come across as incredibly sweet and heart wrenching, especially to those who have had pets pass away.
17* Servo, playing with his bow and arrow, accidentally shoots a baby satellite. Despite the silliness of the sketch's premise, Servo's dialogue and acting are an extremely realistic depiction of a child's regret and sorrow after making such a mistake. The satellite ''somehow'' manages to be a RidiculouslyCuteCritter despite being nothing more than an object, and its mother coming to reclaim it is a majestic [[SugarWiki/HeartwarmingMoments Heartwarming Moment]].
18* The song "The Greatest Frank of All" has also fallen into this. From an in universe perspective it’s a goofy song to cheer Frank up during his lowest point. Outside of it, however, the song is a tribute to musician Music/FrankZappa, who was a fan of the show who died in 1993. The ending bit especially hits hard as a picture of Zappa appears in the ending credits with the lyric “please don’t go” sung over it. Anyone who loved Zappa’s music was touched and brought to tears with this moment.
19* Servo's head explodes in ''Star Force: Fugitive Alien II'', but this time it's a serious, critical injury. Joel's despair is pretty sad during the host segment.
20* Crow and Servo both wind up being incredibly depressed after the DownerEnding of ''The Sidehackers''. Even the song Joel sings is pretty melancholy.
21* The end of ''Danger! Death Ray'' has the protagonist destroying several cameras, which drives [[NotSoStoic Cambot]] into actual tears. Crow and Tom proceeding to call him a baby doesn't help.
22* The "[[https://www.youtube.com/watch?v=qamCu-w7rsc Clown in the Sky]]" song from the closing host segment for ''Pod People'' is really quite melancholy (aside from Joel getting angry at Tom Servo's Creator/AnthonyNewley impression, and the Mads' reaction of "It stinks!").
23* Kinga Forrester gets quite an AlasPoorVillain treatment when it turns out her grandmother barely seems to acknowledge her existence and her restarting the experiments suddenly looks like just her latest desperate attempt for approval. She's driven to tears within a couple minutes of still failing to get a positive response.
24** She gets another one when [Neville, a magician she was conversing with, decides not to meet her physically, saying he loves her too much to do that. It doesn't help that it shows that Max is in love with Kinga as well.
25* The guys are all quite disturbed by the unusually drawn-out and realistic death of the monster in ''Yongary'', asking if Werner Herzog directed it. They end up doing a whole song about the feeling of just having seen a movie with such a scene, and being unable to stop thinking about it. Even Kinga and Max are upset about it and wonder if they should turn away from their evil ways... [[IgnoredEpiphany for a few seconds, anyway]].
26* Jonah getting “killed” at the end of ''At The Earth's Core''. Joel and Mike were eventually able to escape captivity and return to their normal lives, but for the moment, it appears Jonah will not.
27** The bots are noticeably nonplussed, and cast interviews revealed their basic attitude is "they'll just send another one up." Tom and Crow are so conditioned to losing their friends that they don't even really bother bonding with anyone anymore.
28*** He does get an UnexplainedRecovery by Season 12, likely having to do with his homemade spacesuit.
29* The drop-in character who stops by Moon 13 in the end of ''The Day Time Ended'': An older, “less mad” Larry Erhardt, on his way to scatter Dr. Forrester and TV’s Frank’s ashes in space according to their wishes.
30* In ''Lords of the Deep'', the Bots comment that a scene is like when they watch Jonah sleep, "except with less screaming and thrashing and sobbing about 'Will I ever get to see my loved ones again?'". Luckily, he actually does escape at the end of the season. Kind of.
31* In October 2023, there was an attempt to crowdfund a new season of [=MST3K=]. However, due to a number of problems, such as it launching in the middle of the 2023 WGA/SAG-AFTRA strike (thus preventing fans from knowing if previous actors would return), the disgruntlement from fans over the Season 13 rewards and using a non-Kickstarter program, the crowdfund failed with only $2.7 million of the base $4 million raised.

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